mpi running

./mpiexec -np 2 $HOME/neuron/nrn/x86_64/bin/nrniv -mpi $HOME/neuron/nrn/src/parallel/test0.hoc

mpi configure

./configure –prefix=$HOME/mpich –with-device=ch3:nemesis –enable-sharedlibs=gcc –with-pm=gforker –enable-fast=03 MPICH2LIB_CFLAGS=-march=native MPICH2LIB_FFLAGS=-march=native MPICH2LIB_CXXFLAGS=-march=native MPICH2LIB_F90FLAGS=-march=native

PATH regist

export $PATH=

.mpd.conf

chmod 600 .mpd.conf

MPD_SECRETWORD=whatever

NEURON configure

./configure --prefix=/home/NeuroMorph/neuron/nrn --with-iv=/home/NeuroMorph/neuron/iv --with-paranrn always_call_mpi_init=yes MPICC=/home/NeuroMorph/mpich/bin/mpicc MPICXX=/home/NeuroMorph/mpich/bin/mpicxx